Publications

 
 
 

     

    Odor Coding in the Olfactory System

  1. Bazhenov M, Huerta R, Smith B. A computational framework for understanding decision making through integration of basic learning rules, Journal of Neuroscience, 2013 Mar 27;33(13):5686-97.

  2. Bazhenov M and Stopfer M. Olfactory computation in antennal lobe and mushroom bodies, Encyclopedia of Computational Neuroscience, Springer, 2013, in press.

  3. Smith, B., Huerta, R., Bazhenov, M., Sinakevitch, I. Distributed Plasticity for Olfactory Learning and Memory in the Honey Bee Brain. Honeybee Neurobiology and Behavior: A Tribute to Randolf Menzel. Editors: G.C. Galizia. 2012. Springer Science+Business Media B.V.

  4. Assisi C, Stopfer M, Bazhenov M. Excitatory local interneurons enhance tuning of sensory information. PLoS Computational Biology, 2012, Jul;8(7):e1002563.

  5. Assisi C, Bazhenov M. Synaptic inhibition controls transient oscillatory synchronization in a model of the insect olfactory system. Front Neuroeng. 2012;5:7. Epub 2012 Apr 18.

  6. Assisi C, Stopfer M, Bazhenov M. Using the structure of inhibitory networks to unravel mechanisms of spatiotemporal patterning. Neuron. 2011 Jan 27;69(2):373-86.

  7. Bazhenov M, Stopfer M. Forward and back: motifs of inhibition in olfactory processing. Neuron. 2010 Aug 12;67(3):357-8.

  8. Ito I, Bazhenov M, Ong RC, Raman B, Stopfer M. Frequency transitions in odor-evoked neural oscillations. Neuron. 2009 Dec 10;64(5):692-706.

  9. G.Turner, M.Bazhenov and G.Laurent. Olfactory representations by drosophila mushroom body neurons. J Neurophys, 2008 Feb;99(2):734-46.

  10. L.Finelli, S.Haney, M.Bazhenov, M.Stopfer, T.J.Sejnowski. Activity-dependent synaptic plasticity selects synchronous ensembles for a sparse code in the mushroom body. PLoS Comp Biology, 2008.

  11. C.Assisi, M.Stopfer, G.Laurent, M.Bazhenov. Adaptive regulation of sparseness by feedforward inhibition. Nature Neurosci, 2007, Sep;10(9):1176-84

  12. M.Bazhenov and M.Stopfer. Theoretical and Computational Neuroscience: Olfactory Coding. New Encyclopedia of Neuroscience (eds: Larry Squire, Tom Albright, Floyd Bloom, Fred Gage and Nick Spitzer) Elsevier, 2008.

  13. M.Bazhenov, M.Stopfer, T.J.Sejnowski and G.Laurent. Fast odor learning improves reliability of odor responses in the locust antennal lobe. Neuron, 2005 May;46(3): 483-492.

  14. J.Perez-Orive, M.Bazhenov and G.Laurent. Intrinsic and circuit properties favor coincidence detection for decoding oscillatory input. J.Neurosci., 2004 Jun 30;24(26):6037-47.

  15. M.Bazhenov, M.Stopfer, M.Rabinovich, R.Huerta, H.D.I.Abarbanel, T.J.Sejnowski and G.Laurent. Model of transient oscillatory synchronization in the locust antennal lobe. Neuron 30 (2001) 553-567.

  16. M.Bazhenov, M.Stopfer, M.Rabinovich, H.D.I.Abarbanel, T.J.Sejnowski and G.Laurent. Model of cellular and network mechanisms for odor-evoked temporal patterning in the locust antennal lobe. Neuron 30 (2001) 569-581.


    Mechanisms of Focal and Generalized Spike-Wave Seizures

  17. Krishnan GP, Filatov G, Bazhenov M. Dynamics of high frequency synchronization during seizures, Journal of Neurophysiology, 2013, May;109(10):2423-37.

  18. Volman V, Bazhenov M, Sejnowski TJ. Divide and conquer: Functional segregation of synaptic inputs by astrocytic microdomains could alleviate paroxysmal activity following brain trauma, PLoS Computational Biology, 2013 Jan;9(1):e1002856.

  19. Timofeev, I., Bazhenov, M., Seigneur, J., Sejnowski, T.J. Neuronal synchronization and thalamocortical rhythms in sleep, wake and epilepsy. Jasper's Basic Mechanisms of the Epilepsies. Editors: Noebels JL, Avoli M, Rogawski MA, Olsen RW, Delgado-Escueta AV. 2012. Oxford University Press. New York.

  20. Volman V, Bazhenov M, Sejnowski TJ. Computational models of neuron-astrocyte interaction in epilepsy, Frontiers in Computational Neuroscience, 2012, 6:58. doi: 10.3389/fncom.2012.00058

  21. Krishnan GP, Bazhenov M. Ionic dynamics mediate spontaneous termination of seizures and post-ictal depression state. Journal of Neuroscience, 2011, Jun 15;31(24):8870-82

  22. Volman V, Perc M, Bazhenov M. Gap junctions and epileptic seizures - two sides of the same coin? PloS One, 2011;6(5):e20572.

  23. Volman V, Bazhenov M, Sejnowski TJ. Pattern of trauma determines the threshold for epileptic activity in a model of cortical deafferentation. Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):15402-7

  24. Volman V, Sejnowski TJ, Bazhenov M. Topological basis of epileptogenesis in a model of severe cortical trauma. Journal of Neurophysiology, 2011 Oct;106(4):1933-42

  25. Filatov G, Krishnan GP, Rulkov NF, Bazhenov M. Dynamics of epileptiform activity in mouse hippocampal slices. J Biol Physics 2011 Jun;37(3):347-60.

  26. Frohlich F, Sejnowski TJ, Bazhenov M. Network bistability mediates spontaneous transitions between normal and pathological brain states. J Neurosci. 2010 Aug 11;30(32):10734-43.

  27. Timofeev I, Bazhenov M, Avramescu S, Nita DA. Posttraumatic epilepsy: the roles of synaptic plasticity. Neuroscientist. 2010 Feb;16(1):19-27.

  28. F.Frohlich, M.Bazhenov, V.Iragui-Madoz and T.J.Sejnowski. Potassium dynamics in the epileptic cortex: new insights on an old topic. Neuroscientist. 2008 Oct;14(5):422-33.

  29. M.Bazhenov, I.Timofeev, F.Frohlich and T.J.Sejnowski. Cellular and network mechanisms of electrographic seizures. Drug Discovery Today: Disease Models, 2008, 5(1):45-57.

  30. S.Boucetta, S.Chauvette, M.Bazhenov and I.Timofeev. Focal generation of paroxyzmal fast runs during electrographic seizures. Epilepsia, 2008, 1-16.

  31. F.Frohlich, T.J.Sejnowski., M.Bazhenov. Extracellular potassium mediates transitions between physiological and pathological cortical network dynamics. PNAS, 2008, submitted.

  32. F.Frohlich, M.Bazhenov, T.J.Sejnowski. Pathological effect of homeostatic synaptic scaling on network dynamics in diseases of the cortex. J Neurosci, 2008 Feb 13;28(7):1709-20.

  33. F.Frohlich, I.Timofeev, T.J.Sejnowski and M.Bazhenov. Extracellular potassium dynamics and epileptogenesis. In: Computational Neuroscience in Epilepsy, Editors: Ivan Soltesz and Kevin Staley, Elsevier 2008.

  34. M.Bazhenov, A.Houweling, I.Timofeev and T.J.Sejnowski. Homeostatic plasticity and post-traumatic epileptogenesis. In: Computational Neuroscience in Epilepsy, Editors: Ivan Soltesz and Kevin Staley, Elsevier 2008.

  35. F.Frohlich, M.Bazhenov, I.Timofeev and T.J.Sejnowski. Maintenance and termination of neocortical oscillations by dynamic modulation of intrinsic and synaptic excitability. Thalamus & Related Systems, 2007, Jun 3(02), 147-156.

  36. F.Frohlich, M.Bazhenov, I.Timofeev, M.Steriade, and T.J.Sejnowski. Slow state transitions of sustained neural oscillations by activity-dependent modulation of intrinsic excitability. J.Neurosci, June 7, 2006, 26(23):6153-6162.

  37. I.Timofeev, M.Bazhenov. Mechanisms of cortical trauma induced epileptogenesis and seizures. Recent Res. Devel. Physiol., 3 (2005) 99-139.

  38. A.Houweling, M.Bazhenov, I.Timofeev, M.Steriade and T.J.Sejnowski. Homeostatic plasticity can explain posttraumatic epileptogenesis. Cerebral Cortex, 2005, 15:834-845.

  39. M.Bazhenov, I.Timofeev, M.Steriade, and T.J.Sejnowski. Potassium model for slow (2-3 Hz) neocortical paroxysmal oscillations in vivo. J.Neurophys., 2004 Aug;92(2):1116-32.

  40. I.Timofeev, M.Bazhenov, T.J.Sejnowski and M.Steriade. Cortical hyperpolarization-activated depolarizing current takes part in the generation of focal paroxysmal activities. Proc Natl Acad Sci U S A. 2002 Jul 9;99(14):9533-7.


    Sleep Rhythms, Plasticity and Information Coding

  41. Chen JY, Chauvette S, Skorheim S, Timofeev I, Bazhenov M. Interneuron-mediated inhibition synchronizes neuronal activity during slow oscillation. J Physiol. 2012 May 28.

  42. Bazhenov, M., Mackeig, S. Multiscale. EEG Dynamics and Brain Function. Principles of Brain Dynamics: Global State Interactions. Editors: M. Rabinovich and P. Varona, 2012, MIT.

  43. Bonjean M, Baker T, Bazhenov M, Cash S, Halgren E, Sejnowski T. Interactions between core and matrix thalamocortical projections in human sleep spindle synchronization. J Neurosci. 2012 Apr 11;32(15):5250-63.

  44. Bazhenov M, Lonjers P, Skorheim S, Bedard C, Destexhe A. Non-homogeneous extracellular resistivity affects the current-source density profiles of Up/Down state oscillations. Philosophical Transactions of the Royal Society A. 2011, Oct 13;369(1952):3802-19

  45. Bonjean, M., Baker, T., Lemieux , M., Timofeev, I., Sejnowski, T.J., Bazhenov, M. Corticothalamic Feedback Controls Sleep Spindle Duration In Vivo. Journal of Neuroscience. 2011. Vol. 31: 25 p.9124-34.

  46. Moldakarimov S, Bazhenov M, Sejnowski TJ. Perceptual priming leads to reduction of gamma frequency oscillations. Proc Natl Acad Sci U S A. 2010 Mar 23;107(12):5640-5.

  47. Moldakarimov S, Bazhenov M, Sejnowski TJ. Representation sharpening can explain perceptual priming. Neural Comput. 2010 May;22(5):1312-32.

  48. M.Bazhenov, N.F.Rulkov and I.Timofeev. Effect of Synaptic Connectivity on Long-Range Synchronization of Fast Cortical Oscillations. Journal of Neurophys, 2008, Sep;100(3):1562-75.

  49. N.F.Rulkov and M.Bazhenov. Oscillations and synchrony in large-scale models of cortical network. J Biological Physics, 2008, 34:279-299.

  50. M.Bazhenov and I.Timofeev. Intrinsic and synaptic mechanisms of cortical active states generation during slow wave sleep. In: "Mechanisms of spontaneous active states in the neocortex", Editor: Igor Timofeev, Research Signpost 2007, 37/661 (2).

  51. F.Frohlich and M.Bazhenov. Coexistence of tonic firing and bursting in cortical neurons. Physical Review E, 2006 Sept 28; Vol. 74, No. 3.

  52. M.Bazhenov and I.Timofeev. Thalamocortical Oscillations. Scholarpedia, 2006, p. 2143.

  53. M.Bazhenov, N.Rulkov, J.-M.Fellous, I.Timofeev. Role of network dynamics in shaping spike timing reliability. Physical Review E, 72, 041903 2005.

  54. I.Timofeev and M.Bazhenov. Mechanisms and biological role of thalamocortical oscillations. In: "Trends in Chronobiology Research", Editor: Frank Columbus, 2005, 1-47.

  55. N.Rulkov, I.Timofeev and M.Bazhenov. Oscillations in large-scale cortical networks: map-based model. Journal of Computational Neuroscience 2004 Sep-Oct;17(2):203-23.

  56. P.Fuentealba, I.Timofeev, M.Bazhenov, T.J.Sejnowski and M.Steriade. Membrane bistability in thalamic reticular neurons during spindle oscillations. J.Neurophys., 2005 Jan;93(1):294-304.

  57. P.Fuentealba, S.Crochet, I.Timofeev, M.Bazhenov, T.J.Sejnowski and M.Steriade. Experimental evidence and modeling studies support a synchronizing role for electrical coupling in the cat thalamic reticular neurons in vivo. Eur J Neurosci. 2004 Jul;20(1):111-9.

  58. M.Bazhenov, I.Timofeev, M.Steriade and T.J.Sejnowski. Model of thalamocortical slow-wave-sleep oscillations and transitions to activated states. J.Neurosci. 2002 Oct 1;22(19):8691-704.

  59. F.Howell, M.Bazhenov, P.Rogister, T.Sejnowski and N.Goddard. Scaling a slow-wave sleep cortical network model using NEOSIM. Neurocomputing, 2002 Jun 44-46: 453-458

  60. A.Houweling, M.Bazhenov, I.Timofeev, F. Grenier, M.Steriade and T.J.Sejnowski. Frequency-selective augmenting responses by short-term synaptic depression in cat neocortex. J Physiol. 2002 Jul 15;542(Pt 2):599-617.

  61. I.Timofeev, F. Grenier, M.Bazhenov, A.Houweling, T.J.Sejnowski and M.Steriade. Short- and medium-term plasticity associated with augmenting responses in cortical slabs and spindles in intact cortex of cats in vivo. J Physiol. 2002 Jul 15;542(Pt 2):583-98.

  62. I.Timofeev, M.Bazhenov, T.J.Sejnowski and M.Steriade. Contribution of intrinsic and synaptic factors in the desynchronization of thalamic oscillatory activity. Thalamus & Related System 1 (2001) 53-69.

  63. I.Timofeev, F.Grenier, M.Bazhenov, T.J.Sejnowski and M.Steriade. Origin of slow cortical oscillations in the deafferented cortical slab. Cerebral Cortex 10 (2000) 1185-1199.

  64. M.Bazhenov, I.Timofeev, M.Steriade and T.J.Sejnowski. Spiking-bursting activity in the thalamic reticular nucleus initiates sequences of spindle oscillations in thalamic networks. Journal of Neurophysiology 84 (2000) 1076-1087.

  65. A.R.Houweling, M.Bazhenov, I.Timofeev, M.Steriade and T.J.Sejnowski. Cortical and thalamic components of augmenting responses: a modeling study. Neurocomputing 26 (1999) 735-742.

  66. M.Bazhenov, I.Timofeev, M.Steriade and T.J.Sejnowski. Self-sustained rhythmic activity in the thalamic reticular nucleus mediated by depolarizing GABA-A receptor potentials. Nature Neuroscience 2 (1999) 168-174.

  67. M.Bazhenov, I.Timofeev, M.Steriade and T.J.Sejnowski. Computational Models of Thalamocortical Augmenting Responses. Journal of Neuroscience 18 (16) (1998) 6444-6465.

  68. M.Bazhenov, I.Timofeev, M.Steriade and T.J.Sejnowski. Cellular and network models for intrathalamic augmenting responses during 10 Hz stimulation. Journal of Neurophysiology 79 (1998) 2730-2748.

  69. M.Rabinovich, R.Huerta, M.Bazhenov, A.K.Kozlov and H.D.I.Abarbanel. Computer simulations of stimulus dependent state switching in basic circuits of bursting neurons. Physical Review E 58 (1998) 6418-6430.

  70. M.Bazhenov, R.Huerta, M.Rabinovich, T.Sejnowski. Cooperative behavior of a chain of synaptically coupled chaotic neurons. Physica D 116 (1998) 392-400.

  71. R.Huerta, M.Bazhenov, M.Rabinovich. Clusters of synchronization and bistability in lattices of chaotic neurons. Europhysics Letters 43 (1998) 719-724.

  72. R.Huerta, M.Rabinovich, H.Abarbanel, M.Bazhenov. Spike-train bifurcation scaling in two coupled chaotic neurons. Physical Review E 55 (1997) R2108-R2110.

  73. A.K.Kozlov, R.Huerta, M.I.Rabinovich, H.D.I.Abarbanel, M.V.Bazhenov. Neuronal ensembles with balanced interconnection as receptors of information. Doklady Akademii Nauk 357(4-6) (1997) 752-757. Translation: Physics-Doklady 42(12) (1997) 664-669.

  74. H.Abarbanel, M.Rabinovich, A.Selverston, M.Bazhenov, R.Huerta, M.Sushchik and L.Rubchinsky. Synchronization in neural networks. Physics-Uspekhi 39(4) (1996) 337-362.

  75. M.V.Bazhenov, M.I.Rabinovich, L.L.Rubchinsky. A simple model for a neuron with complex oscillatory activity. Izv. VUZov. Prikladnaya nelineinaya dinamika 4(1) (1996) 33-39.

  76. M.Bazhenov, M.Rabinovich and L.Rubchinsky. An oscillatory neural network unit model. In: Chaotic, Fractal, and Nonlinear Signal Processing. R.A.Katz ed. AIP Press (1996) 726-733.


    Nonequilibrium Media and Pattern Formation

  77. M.Bazhenov, K.Gorshkov, M.Rabinovich, T.Bohr. Stationary and quasistationary solutions of the complex Ginzburg-Landau equation. Izvestiya Rossiiskoi Akademii Nauk. Seriya Fizicheskaya 61 suppl. (1997). Translation: Bulletin of the Russian Academy of Sciences. Physics 61 suppl. (1997) 22-27.

  78. M.Bazhenov, M.Rabinovich and L.Rubchinsky. Time-periodic spatial disorder in a complex Ginzburg-Landay equation. In: Chaotic, Fractal, and Nonlinear Signal Processing. R.A.Katz ed. AIP Press (1996) 533-540.

  79. M.Bazhenov, T.Bohr, K.Gorshkov, M.Rabinovich. The diversity of steady state solutions of the complex Ginzburg-Landau equation. Physical Letters A 217 (1996) 104-110.

  80. M.Bazhenov, M.Rabinovich, L.Rubchinsky. Time-periodic spatial chaos in the complex Ginzburg-Landau equation. Journal of Statistical Physics 83 (1996) 1165-1181.

  81. M.V.Bazhenov, M.I.Rabinovich, L.L.Rubchinskii. Periodic evolution of space chaos in the one-dimensional complex Ginzburg-Landau equation. Izvestiya VUZov Radiophysics 38(1-2) (1995) 37-43. Translation: Radiophysics and Quantum Electronics 38(1-2) (1995) 25-39.

  82. M.Bazhenov, T.Bohr, K.Gorshkov, M.Rabinovich. The stationary and quasi-stationary solutions of complex Ginzburg-Landau equation. In: Nonlinear Waves. Synchronization and Patters, Nizhny Novgorod University Press 2 (1995) 9-14.

  83. M.Bazhenov, M.Rabinovich. Synchronized disorder in a 2D complex Ginzburg-Landau equation. Physica D 73 (1994) 318-334.

  84. M.Bazhenov, M.Rabinovich. The screening of spiral field in a 2D complex Ginzburg-Landau equation. Physical Letters A 179 (1993) 191-197.

  85. M.V.Bazhenov, M.I.Rabinovich. The interaction of structures and spatio-temporal chaos in models of coupled waves. International Journal of Bifurcation and Chaos 3 (1992) 153-164.

  86. M.V.Bazhenov, M.I.Rabinovich, A.L.Fabrikant. The "amplitude"-"phase" turbulent transition in a Ginzburg-Landau model as a critical phenomenon. Physical Letters A 163 (1992) 87-94.


    Nonlinear Dynamical Systems: Application of Differential Inequalities and Bifurcation Theory

  87. M.V.Bazhenov, E.F.Sabaev. Limited power bursts in distributed models of nuclear reactors. Atomnya Energia 74(6) (1993) 466-472. Translation: Atomic Energy 74 (1993) 433-439.

  88. M.V.Bazhenov, S.V.Kiyashko, M.I.Rabinovich. Chaotic dynamics of a simple electron circuit. Izv. VUZov. Prikladnaya nelineinaya dinamika 2(2) (1994) 81-100.

  89. M.V.Bazhenov, E.F.Sabaev.Global boundedness of solutions to some equations of mathematical physics. Izv. VUZov. Prikladnaya nelineinaya dinamika 2(1) (1994) 52-58.

  90. M.V.Bazhenov, S.V.Kiyashko, M.I.Rabinovich. Bifurcations and the generation of chaos in a simple electric circuit. Phystech Journal 1 (1994) 3-23.

  91. M.V.Bazhenov, E.F.Sabaev. Application of differential inequalities to the proof of global boundedness of solutions to a particular class of equations of mathematical physics. Preprint N338, Institute of Applied Physics RAS, Nizhny Novgorod, 1993.

  92. M.V.Bazhenov, E.F.Sabaev. The application of differential inequalities to the investigation of the conditions for global boundedness of the solutions to the equations of reactor dynamics. Prikladnuye problemu teorii kolebany (1993) 124-135.

  93. M.V.Bazhenov. The existence of explosive solutions of the equation of reactor dynamics. Prikladnuye problemu teorii kolebany (1991) 95-103.

  94. M.V.Bazhenov, V.D.Goryatchenko. On the investigation of stability and oscillations within a 3-D model of reactor dynamics. Prikladnuye problemu teorii kolebany (1991) 84-94.

  95. M.V.Bazhenov. The qualitative investigation of a model for the dynamics of a reactor with nonlinear regulator. Prikladnuye problemu teorii kolebany (1990) 89-96.

  96. M.V.Bazhenov, V.D.Goryatchenko, A.V.Privalov. The investigation into nonlinear models of reactor dynamics on the phase plane. Prikladnuye problemu teorii kolebany (1990) 79-88.

  97. M.V.Bazhenov. Investigation of a model for the dynamics of a reactor with nonlinear delayed feedback. Voprosu atomnoy nayki i techniki 5 (1990) 29-35.

  98. M.V.Bazhenov, V.D.Goryatchenko. The investigation of stability of a coupled system with delay. Prikladnuye problemu teorii kolebany (1989) 46-53.

  99. M.V.Bazhenov. Numerical and analytical investigation of a 2-D diffusion dynamical model for a reactor with power-type delayed feedback. Voprosu atomnoy nayki i techniki 3 (1989) 16-23.